BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C11SP1|AL430522
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1233 1863 0.0
>3x_Contig1233
Length = 4604
Score = 1863 bits (939), Expect = 0.0
Identities = 940/941 (99%)
Strand = Plus / Plus
Query: 1 tgggaaccaggctgctatcaatgctgcaggtttcaagatccactctcatttacacaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tgggaaccaggctgctatcaatgctgcaggtttcaagatccactctcatttacacaaggc 1200
Query: 61 aaggccagatgttaatgctgcttgtcatacccattccacgtatggtaaggcatggtctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aaggccagatgttaatgctgcttgtcatacccattccacgtatggtaaggcatggtctgc 1260
Query: 121 gtttggtaaaccattagaaatgttaaaccaggatgtttgcatgttttacaagaagcatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtttggtaaaccattagaaatgttaaaccaggatgtttgcatgttttacaagaagcatac 1320
Query: 181 tgtgtacgagtcgtttggtggtgtggtattggaagatgaggagggacaaagactggctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tgtgtacgagtcgtttggtggtgtggtattggaagatgaggagggacaaagactggctga 1380
Query: 241 agcattgggtgataacaaagcaatcatcttacaaaaccatgggcttttgaccgttggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 agcattgggtgataacaaagcaatcatcttacaaaaccatgggcttttgaccgttggaga 1440
Query: 301 gacggcggatgaggcaggctatttatttaccttgatggagaaatgttgccaagttcagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gacggcggatgaggcaggctatttatttaccttgatggagaaatgttgccaagttcagtt 1500
Query: 361 gctcatcgaatcggcagtcagatctggtcttgaaaagaaattgattggagatgaggaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gctcatcgaatcggcagtcagatctggtcttgaaaagaaattgattggagatgaggaggc 1560
Query: 421 tgatttcacatatttcaacacttcggacccagaaacattatacacagagttccaagtcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 tgatttcacatatttcaacacttcggacccagaaacattatacacagagttccaagtcga 1620
Query: 481 ttacgatctcgaaatggagctaaccaacggggcattcctcaaatagactgcctaactagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ttacgatctcgaaatggagctaaccaacggggcattcctcaaatagactgcctaactagt 1680
Query: 541 tattaagtatcacattctaacgtacgtacatataatgatgtaaaataatgattacatcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tattaagtatcacattctaacgtacgtacatataatgatgtaaaataatgattacatcac 1740
Query: 601 gtgactcttgtcgaaaggaactacggaggcggaaaaagtaagcattaggagtccaccatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 gtgactcttgtcgaaaggaactacggaggcggaaaaagtaagcattaggagtccaccatt 1800
Query: 661 acacttgaccttagctaccgtaccccctctcagatcagtaaagctgccatttcgttctgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 acacttgaccttagctaccgtaccccctctcagatcagtaaagctgccatttcgttctgt 1860
Query: 721 ttactgattgtgtatttacaaatattaaattccaacgaaatgtcgtctaatgtcaactac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 ttactgattgtgtatttacaaatattaaattccaacgaaatgtcgtctaatgtcaactac 1920
Query: 781 ttactagaaatgccttaaacgaacacaacactacaacaagcaaagactgccaaagtctgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ttactagaaatgccttaaacgaacacaacactacaacaagcaaagactgccaaagtctgt 1980
Query: 841 gattcaaaggtgcaggctccacgtctatctgtaataactatgggtaagadaggctactat 900
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1981 gattcaaaggtgcaggctccacgtctatctgtaataactatgggtaagaaaggctactat 2040
Query: 901 gccgttgcaaatggcagaaacgttggtgttttcgattcatg 941
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gccgttgcaaatggcagaaacgttggtgttttcgattcatg 2081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6087
Number of Sequences: 1807
Number of extensions: 6087
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)